Cruz Bournazou, Mariano Nicolás (). An approach to Mechanism Recognition for model based analysis of Biological Systems. Technische Universität Berlin.

Neubauer, P. and Hofmann, K. and Holst, O. and Mattiasson, B. and Kruschke, P. (1992). Maximizing the expression of a recombinant gene in Escherichia coli by manipulation of induction time using lactose as inducer. Applied microbiology and biotechnology

Neubauer, P. and Häggström, L. and Enfors, S. O. (1995). Influence of substrate oscillations on acetate formation and growth yield in Escherichia coli glucose limited fed-batch cultivations. Biotechnology and bioengineering, 139–146.

Neubauer, P. and Åhman, M. and Törnkvist, M. and Larsson, G. and Enfors, S.-O. (1995). Response of guanosine tetraphosphate to glucose fluctuations in fed-batch cultivations of Escherichia coli. Journal of biotechnology, 195–204.

Andersson, L. (1996). Impact of plasmid presence and induction on cellular responses in fed batch cultures of Escherichia coli. Journal of biotechnology, 255–263.

Teich, A. and Meyer, S. and Lin, H. Y. and Andersson, L. and Enfors, S. and Neubauer, P. (1999). Growth rate related concentration changes of the starvation response regulators sigmaS and ppGpp in glucose-limited fed-batch and continuous cultures of Escherichia coli. Biotechnology progress, 123–129.

Jürgen, Britta and Lin, Hong Ying and Riemschneider, Stefan and Scharf, Christian and Neubauer, Peter and Schmid, Roland and Hecker, Michael and Schweder, Thomas (2000). Monitoring of genes that respond to overproduction of an insoluble recombinant protein inEscherichia coli glucose-limited fed-batch fermentations. Biotechnology and bioengineering, 217–224.

Winter, J. and Neubauer, P. and Glockshuber, R. and Rudolph, R. (2000). Increased production of human proinsulin in the periplasmic space of Escherichia coli by fusion to DsbA. Journal of biotechnology, 175–185.

Ying Lin, Hong and Neubauer, Peter (2000). Influence of controlled glucose oscillations on a fed-batch process of recombinant Escherichia coli. Journal of biotechnology, 27–37.

Enfors, S.-O. and Jahic, M. and Rozkov, A. and Xu, B. and Hecker, M. and Jürgen, B. and Krüger, E. and Schweder, T. and Hamer, G. and O'Beirne, D. and Noisommit-Rizzi, N. and Reuss, M. and Boone, L. and Hewitt, C. and McFarlane, C. and Nienow, A. and Kovacs, T. and Trägårdh, C. and Fuchs, L. and Revstedt, J. and Friberg, P. C. and Hjertager, B. and Blomsten, G. and Skogman, H. and Hjort, S. and Hoeks, F. and Lin, H.-Y. and Neubauer, P. and van der Lans, R. and Luyben, K. and Vrabel, P. and Manelius, Å. (2001). Physiological responses to mixing in large scale bioreactors. Journal of biotechnology, 175–185.

Lin, H. Y. and Mathiszik, B. and Xu, B. and Enfors, S. O. and Neubauer, P. (2001). Determination of the maximum specific uptake capacities for glucose and oxygen in glucose-limited fed-batch cultivations of Escherichia coli. Biotechnology and bioengineering, 347–357.

Neubauer, P. and Lin, H. Y. and Mathiszik, B. (2003). Metabolic load of recombinant protein production: Inhibition of cellular capacities for glucose uptake and respiration after induction of a heterologous gene in Escherichia coli. Biotechnology and bioengineering, 53–64.

Sandén, Anna Maria and Prytz, Ingela and Tubulekas, Ioannis and Förberg, Cecilia and Le, Ha and Hektor, Andrea and Neubauer, Peter and Pragai, Zoltan and Harwood, Colin and Ward, Alan and Picon, Antonia and de Mattos, Joost Teixeira and Postma, Pieter and Farewell, Anne and Nyström, Thomas and Reeh, Solvejg and Pedersen, Steen and Larsson, Gen (2003). Limiting factors in Escherichia coli fed-batch production of recombinant proteins. Biotechnology and bioengineering, 158–166.

(2004). Physiological Stress Responses in Bioprocesses. Springer Berlin Heidelberg.

Fahnert, Beatrix and Lilie, Hauke and Neubauer, Peter (2004). Inclusion Bodies: Formation and Utilisation. Physiological Stress Responses in Bioprocesses. Springer Berlin Heidelberg, 93–142.

Gabig-Ciminska, M. and Holmgren, A. and Andresen, H. and Bundvig Barken, K. and Wümpelmann, M. and Albers, J. and Hintsche, R. and Breitenstein, A. and Neubauer, P. and Los, M. and Czyz, A. and Wegrzyn, G. and Silfversparre, G. and Jürgen, B. and Schweder, T. and Enfors, S.-O (2004). Electric chips for rapid detection and quantification of nucleic acids. Biosensors and Bioelectronics, 537–546.

Fernandes, Aristi Potamitou and Fladvad, Malin and Berndt, Carsten and Andrésen, Cecilia and Lillig, Christopher Horst and Neubauer, Peter and Sunnerhagen, Maria and Holmgren, Arne and Vlamis-Gardikas, Alexios (2005). A novel monothiol glutaredoxin (Grx4) from Escherichia coli can serve as a substrate for thioredoxin reductase. The Journal of biological chemistry, 24544–24552.

Panula-Perälä, Johanna and Siurkus, Juozas and Vasala, Antti and Wilmanowski, Robert and Casteleijn, Marco G. and Neubauer, Peter (2008). Enzyme controlled glucose auto-delivery for high cell density cultivations in microplates and shake flasks. Microbial cell factories, 31.

Sillankorva, Sanna and Neubauer, Peter and Azeredo, Joana (2008). Pseudomonas fluorescens biofilms subjected to phage phiIBB-PF7A. BMC biotechnology, 79.

Soini, Jaakko and Ukkonen, Kaisa and Neubauer, Peter (2008). High cell density media for Escherichia coli are generally designed for aerobic cultivations - consequences for large-scale bioprocesses and shake flask cultures. Microbial cell factories, 26.

(2009). 10th International Symposium on Process Systems Engineering: Part A. Elsevier.

Bournazou, M. CruzN. and Arellano-Garcia, H. and Schöneberger, J. C. and Junne, S. and Neubauer, P. and Woznya, G. (2009). A Novel Approach to Mechanism Recognition in Escherichia Coli Fed-Batch Fermentations. 10th International Symposium on Process Systems Engineering: Part A. Elsevier, 651–656.

Junne, S. and Stosch, H. and Zavodni, I. and Angersbach, A. and Goetz, P. and Neubauer, P. (2009). Electrooptical monitoring of polarizability and cell size in Escherichia coli continuous cultivations. New Biotechnology, S221-S221.

Junne, Stefan and Nicolas Cruz-Bournazou, M. and Angersbach, Alexander and Götz, Peter (2010). Electrooptical monitoring of cell polarizability and cell size in aerobic Escherichia coli batch cultivations. Journal of industrial microbiology & biotechnology, 935–942.

Cruz Bournazou, M. N. and Arellano-Garcia, H. and Wozny, G. and Lyberatos, G. and Kravaris, C. (2010). Modellreduktion des erweiterten ASM3-Modells für die zweistufige Nitrifikation. Chemie Ingenieur Technik, 1540.

Cruz Bournazou, M. N. and Arellano-Garcia, H. and Junne, S. and Wozny, G. and Neubauer, P. (2010). Neuer Ansatz zur Mechanismenerkennung in E. coli Fed-Batch-Kultivierungen. Chemie Ingenieur Technik, 1503.

Krause, Mirja and Ukkonen, Kaisa and Haataja, Tatu and Ruottinen, Maria and Glumoff, Tuomo and Neubauer, Antje and Neubauer, Peter and Vasala, Antti (2010). A novel fed-batch based cultivation method provides high cell-density and improves yield of soluble recombinant proteins in shaken cultures. Microbial cell factories, 11.

Neubauer, Peter and Junne, Stefan (2010). Scale-down simulators for metabolic analysis of large-scale bioprocesses. Current opinion in biotechnology, 114–121.

Glazyrina, J. and Materne, E. M. and Dreher, T. and Storm, D. and Junne, S. and Adams, T. and Greller, G. and Neubauer, P. (2010). High cell density cultivation and recombinant protein production with Escherichia coli in a rocking- motion- type bioreactor. Microbial Cell Factories

Junne, S. and Cruz-Bournazou, M. N. and Angersbach, A. and Gotz, P. (2010). Electrooptical monitoring of cell polarizability and cell size in aerobic Escherichia coli batch cultivations. Journal of Industrial Microbiology & Biotechnology, 935-942.

Jurgen, B. and Breitenstein, A. and Urlacher, V. and Buttner, K. and Lin, H. Y. and Hecker, M. and Schweder, T. and Neubauer, P. (2010). Quality control of inclusion bodies in Escherichia coli. Microbial Cell Factories

Krause, M. and Ukkonen, K. and Haataja, T. and Ruottinen, M. and Glumoff, T. and Neubauer, A. and Neubauer, P. and Vasala, A. (2010). A novel fed-batch based cultivation method provides high cell-density and improves yield of soluble recombinant proteins in shaken cultures. Microbial Cell Factories

Liedert, C. and Bernhardt, J. and Albrecht, D. and Voigt, B. and Hecker, M. and Salkinoja-Salonen, M. and Neubauer, P. (2010). Two-dimensional proteome reference map for the radiation-resistant bacterium Deinococcus geothermalis. Proteomics, 555-563.

Neubauer, P. and Junne, S. (2010). Scale-down simulators for metabolic analysis of large-scale bioprocesses. Current Opinion in Biotechnology, 114-121.

Osmekhina, E. and Neubauer, A. and Klinzing, K. and Myllyharju, J. and Neubauer, P. (2010). Sandwich ELISA for quantitative detection of human collagen prolyl 4-hydroxylase. Microbial Cell Factories

Schmid, A. and Neubauer, P. (2010). Analytical biotechnology: from single molecule and single cell analyses to population dynamics of metabolites and cells. Current Opinion in Biotechnology, 1-3.

Sillankorva, S. and Neubauer, P. and Azeredo, J. (2010). Phage control of dual species biofilms of Pseudomonas fluorescens and Staphylococcus lentus. Biofouling, 567-575.

Siurkus, J. and Panula-Perala, J. and Horn, U. and Kraft, M. and Rimseliene, R. and Neubauer, P. (2010). Novel approach of high cell density recombinant bioprocess development: Optimisation and scale-up from microlitre to pilot scales while maintaining the fed-batch cultivation mode of E. coli cultures. Microbial Cell Factories

Taskila, S. and Tuomola, M. and Kronlof, J. and Neubauer, P. (2010). Comparison of Enrichment Media for Routine Detection of Beer Spoiling Lactic Acid Bacteria and Development of Trouble-shooting Medium for Lactobacillus backi. Journal of the Institute of Brewing, 151-156.

Taskila, S. and Tuomola, M. and Kronlof, J. and Ruuska, J. and Neubauer, P. (2010). Note - Preliminary Applications of Response Surface Modelling to the Evaluation of Optimal Growth Conditions for Beer-spoiling Pediococcus damnosus. Journal of the Institute of Brewing, 211-214.

Wilmes, B. and Hartung, A. and Lalk, M. and Liebeke, M. and Schweder, T. and Neubauer, P. (2010). Fed-batch process for the psychrotolerant marine bacterium Pseudoalteromonas haloplanktis. Microbial Cell Factories

Budde, Charles F. and Riedel, Sebastian L. and Hübner, Florian and Risch, Stefan and Popović, Milan K. and Rha, ChoKyun and Sinskey, Anthony J. (2011). Growth and polyhydroxybutyrate production by Ralstonia eutropha in emulsified plant oil medium. Applied microbiology and biotechnology, 1611–1619.

Budde, Charles F. and Riedel, Sebastian L. and Willis, Laura B. and Rha, ChoKyun and Sinskey, Anthony J. (2011). Production of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) from plant oil by engineered Ralstonia eutropha strains. Applied and environmental microbiology, 2847–2854.

(2011). 21st European Symposium on Computer Aided Process Engineering. Elsevier.

Cruz Bournazou, M. N. and Hooshiar, K. and Arellano-Garcia, H. and Lyberatos, G. and Kravaris, C. and Wozny, G. (2011). Optimization of a Sequencing Batch Reactor process for waste water treatment using a two step nitrification model. 21st European Symposium on Computer Aided Process Engineering. Elsevier, 1291–1295.

Delvigne, F. and Brognaux, A. and Gorret, N. and Neubauer, P. and Delafosse, A. and Collignon, M. L. and Toye, D. and Crine, M. and Boxus, M. and Thonart, P. (2011). Characterization of the response of GFP microbial biosensors sensitive to substrate limitation in scale-down bioreactors. Biochemical Engineering Journal, 131-139.

Glazyrina, J. and Materne, E. and Hillig, F. and Neubauer, P. and Junne, S. (2011). Two-compartment method for determination of the oxygen transfer rate with electrochemical sensors based on sulfite oxidation. Biotechnology Journal, 1003-1008.

Junne, S. and Klingner, A. and Kabisch, J. and Schweder, T. and Neubauer, P. (2011). A two-compartment bioreactor system made of commercial parts for bioprocess scale-down studies: Impact of oscillations on Bacillus subtilis fed-batch cultivations. Biotechnology Journal, 1009-1017.

Khatri, N. K. and Gocke, D. and Trentmann, O. and Neubauer, P. and Hoffmann, F. (2011). Single-chain antibody fragment production in Pichia pastoris: Benefits of prolonged pre-induction glycerol feeding. Biotechnology Journal, 452-462.

Neubauer, P. (2011). Editorial: Towards faster bioprocess development. Biotechnology Journal, 902-903.